TAP MADS in Phyllostachys heterocycla

Full lineage¹: cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys

Protein source: BambooGDB


The colour code corresponds to the rules for the domains:

should be contained
should not be contained

Domain rules

SRF-TF
K-box

(Domain names are clickable)



List of proteins (12)

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namename additionClick button to show/hide sequence: Download sequence?
PH01000117G1210PH_genemodel_v1 PH01000117..863404..865573 . - . ID=PH01000117G1210;Name=OsMADS37 - MADS-box family gene with MIKC* type-box, expressed
PH01000216G0990PH_genemodel_v1 PH01000216..579306..580473 . - . ID=PH01000216G0990;Name=OsMADS5 - MADS-box family gene with MIKCc type-box, expressed
PH01000222G1060PH_genemodel_v1 PH01000222..700786..703670 . + . ID=PH01000222G1060;Name=OsMADS34 - MADS-box family gene with MIKCc type-box, expressed
PH01000518G0720PH_genemodel_v1 PH01000518..568932..571851 . - . ID=PH01000518G0720;Name=OsMADS65 - MADS-box family gene with MIKC* type-box, expressed
PH01000794G0210PH_genemodel_v1 PH01000794..136094..138076 . - . ID=PH01000794G0210;Name=OsMADS4 - MADS-box family gene with MIKCc type-box, expressed
PH01000954G0350PH_genemodel_v1 PH01000954..195447..198803 . - . ID=PH01000954G0350;Name=Sad1 / UNC-like C-terminal domain containing protein, putative, expressed
PH01001303G0110PH_genemodel_v1 PH01001303..71439..74283 . - . ID=PH01001303G0110;Name=OsMADS37 - MADS-box family gene with MIKC* type-box, expressed
PH01001952G0230PH_genemodel_v1 PH01001952..188728..190513 . - . ID=PH01001952G0230;Name=OsMADS1 - MADS-box family gene with MIKCc type-box, expressed
PH01002152G0090PH_genemodel_v1 PH01002152..71836..75070 . + . ID=PH01002152G0090;Name=OsMADS50 - MADS-box family gene with MIKCc type-box, expressed
PH01002743G0050PH_genemodel_v1 PH01002743..29316..34449 . - . ID=PH01002743G0050;Name=OsMADS18 - MADS-box family gene with MIKCc type-box, expressed
PH01002755G0230PH_genemodel_v1 PH01002755..140758..142604 . - . ID=PH01002755G0230;Name=MADS-box transcription factor, putative, expressed
PH01003178G0150PH_genemodel_v1 PH01003178..64237..65267 . - . ID=PH01003178G0150;Name=OsMADS65 - MADS-box family gene with MIKC* type-box, expressed
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A list of species letter codes included in the protein names can be found here (opens in new tab).

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¹ Information recieved using NCBI E-utilities and NCBI taxonomy database.
Impressum